PPD_0002CVT.1

Uganda/PPD_0002CVT.1/2012

C. G. Albarino, T. Shoemaker, M. L. Khristova, J. F. Wamala, J. J. Muyembe, S. Balinandi, A. Tumusiime, S. Campbell, D. Cannon, A. Gibbons, E. Bergeron, B. Bird, K. Dodd, C. Spiropoulou, B. R. Erickson, L. Guerrero, B. Knust, S. T. Nichol, P. E. Rollin, U. Stroher & M. Khristova

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date

2012

Sampling location

Uganda

Isolate name

Mbg-422-2012

Data use terms

Changed	User	Data use terms
2026-04-02 16:02	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

Clade

MARV.A.1

INSDC

INSDC accession

KC545387.1

NCBI release date

2013-05-19

NCBI update date

2013-06-24

Host

Homo sapiens

Submission details

Submission ID

KC545387.1

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-04-02 16:02:33 UTC

Date released

2026-04-02 16:07:17 UTC

Earliest release date

2013-05-19

Alignment and QC

Length

19114 (100%)

# of SNPs

1173

# of inserted bases

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

A46G
G101A
C115T
T118C
G124A
A169G
C256T
G289A
T304C
G310A
G337A
A346G
A364G
C397T
C433T
C443T
A445G
A502G

Deletions

N/A

Insertions

ins_18681:G, ins_18877:A, ins_19111:A

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference