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PPD_0002EHF.1

Zambia/PPD_0002EHF.1/2018-09-03
M. Kajihara, B. M. Hang'ombe, K. Changula, H. Harima, M. Isono, K. Okuya, R. Yoshida, A. Mori-Kajihara, Y. Eto, Y. Orba, H. Ogawa, Y. Qiu, H. Sawa, E. Simulundu, D. Mwizabi, M. Munyeme, D. Squarre, V. Mukonka, A. Mweene & A. Takada

Research Center for Zoonosis Control; Kita 20, Nishi 10, Kita-ku, Sapporo, Hokkaido 0010020

Sample details

Collection date
2018-09-03
Sampling location
Zambia
Isolate name
R.aegyptiacus/Zambia/2018/ZB18-36

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-02 16:02insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.B

INSDC

INSDC accession
NCBI release date
2019-08-23
NCBI update date
2023-06-17

Host

Host

Submission details

Submission ID
LC465155.1
Submitting group
Date submitted
2026-04-02 16:02:33 UTC
Date released
2026-04-02 16:07:17 UTC
Earliest release date
2019-08-23

Alignment and QC

Length
563 (2.95%)
# of SNPs
21

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • G655T
  • C667T
  • C673T
  • T709C
  • C736T
  • T739C
  • T745C
  • C787T
  • C859T
  • G922A
  • T953C
  • A976G
  • T997C
  • T1036C
  • T1057C
  • A1075G
  • G1099A
  • A1102G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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