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PPD_0002EZH.1

Sierra_Leone/PPD_0002EZH.1/2018
B. R. Amman, B. H. Bird, I. A. Bakarr, J. Bangura, A. J. Schuh, J. Johnny, T. K. Sealy, I. Conteh, A. H. Koroma, I. Foday, E. Amara, A. A. Bangura, A. A. Gbakima, A. Tremeau-Bravard, M. Belaganahalli, J. Dhanota, A. Chow, V. Ontiveros, A. Gibson, J. Turay, K. Patel, J. Graziano, C. Bangura, E. S. Kamanda, ..., S. Kamara

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
2018
Sampling location
Sierra Leone
Isolate name
1000Kasbat SL 2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-02 16:02insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.A.3

INSDC

INSDC accession
NCBI release date
2019-12-22
NCBI update date
2020-02-19

Host

Host

Submission details

Submission ID
MN193419.1
Submitting group
Date submitted
2026-04-02 16:02:33 UTC
Date released
2026-04-02 16:07:17 UTC
Earliest release date
2019-12-22

Alignment and QC

Length
411 (2.15%)
# of SNPs
20

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • A775G
  • C787T
  • A868G
  • T874C
  • C908T
  • T919C
  • G922A
  • A925G
  • C947T
  • C970T
  • T997C
  • G1018A
  • C1030T
  • T1057C
  • A1075G
  • G1087A
  • G1099A
  • G1117A
  • C1150T
  • T1156C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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