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PPD_0002FHE.1

Sierra_Leone/PPD_0002FHE.1/2017-11-14

Sample details

Collection date
2017-11-14
Sampling location
Sierra Leone
Isolate name
PREDICT_SLAB3397

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-02 16:02insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.A.3

INSDC

INSDC accession
BioProject accession
NCBI release date
2022-01-26
NCBI update date
2022-01-26

Host

Host

Submission details

Submission ID
MT929356.1
Submitting group
Date submitted
2026-04-02 16:02:33 UTC
Date released
2026-04-02 16:07:17 UTC
Earliest release date
2022-01-26

Alignment and QC

Length
587 (3.07%)
# of SNPs
27

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • T12626C
  • T12627C
  • T12656C
  • G12668A
  • G12674T
  • T12703A
  • A12725G
  • T12728C
  • T12797A
  • C12845T
  • T12860C
  • T12875C
  • C12899T
  • C12929T
  • T12932C
  • T12947C
  • C12950T
  • A12961G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference

Substitutions

L

  • L:F408Y
  • L:Q494R
  • L:E536D
Deletions
N/A
Insertions
N/A

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