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PPD_000B4RR.1

Display Name: Bangladesh/PPD_000B4RR.1/2024-11-26
M. Talha, Y. Karim, M. S. Alam, R. Howlader, R. Rahman, S. Khair, A. Al Faisal, A. Haque, M. N. Begum & M. Rahman

Sample details

Collection date
2024-11-26
Country
Bangladesh
Isolate name
04_1241111024_2024_Bangladesh

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-17 10:45insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B1

Authors

Author affiliations
icddr, b, Virology Laboratory, Infectious Diseases Division (IDD)

INSDC

INSDC accession
NCBI release date
2025-03-16
NCBI update date
2025-03-16

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
401
# of SNPs
54
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
Completeness
3.00%

Submission details

Submission ID
PV088187.1
Submitting group
Date submitted
2025-09-17 10:45:53 UTC
Date released
2025-09-17 12:02:22 UTC
Earliest release date
2025-03-16

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

  • C564A
  • G573T
  • C577T
  • C585T
  • C591T
  • G597A
  • C603T
  • C604A
  • T606A
  • A609G
  • G627A
  • T636C
  • A640G
  • G642A
  • C645T
  • C660T
  • C669T
  • C675A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_039199.1 reference

    Substitutions

    N

  • N:M201V
  • N:D212E
  • N:H220Y
  • N:M258L
  • N:A280S
    • Deletions
    None
    Insertions
    None

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