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PPD_000R6N0.1
Download
Download FASTA
Download metadata TSV
USA/PPD_000R6N0.1/2026-06-15
R. Sainsbury
Utah Public Health Laboratory Infectious Disease submission group, Utah Public Health Laboratory
Sample details
Collection date
2026-06-15
Sampling location
USA (Virginia)
Isolate name
MVs/Virginia.USA/24.26/UT-UPHL-260807322169 [D8]
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Genotype
Genotype
D8
INSDC
INSDC accession
PZ830718.1
BioProject accession
PRJNA1293457
BioSample accession
SAMN62352556
NCBI release date
2026-08-19
NCBI update date
2026-08-19
Raw reads accession
SRR40124004
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ830718.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-08-28 12:03:35 UTC
Date released
2026-08-28 12:27:05 UTC
Earliest release date
2026-08-19
Alignment and QC
Length
14853 (60.5%)
# of SNPs
298
# of unknown bases
5241
Nucleotide mutations
Mutations called relative to the
NC_001498.1
reference
Substitutions
T
791
C
G
807
A
G
809
C
T
860
C
T
881
C
C
1043
T
A
1055
G
G
1076
A
C
1101
T
C
1103
A
C
1145
T
A
1151
G
A
1229
G
C
1253
T
T
1324
C
G
1334
A
C
1337
T
C
1352
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_001498.1
reference
Substitutions
C
C:
G
181
V
F
F:
A
9
V
F:
F
11
V
F:
S
276
A
H
H:
R
175
K
H:
G
235
E
H:
G
243
E
H:
A
267
I
H:
R
334
Q
H:
N
390
I
H:
A
400
T
H:
V
412
L
H:
N
416
D
H:
T
446
S
H:
V
451
M
H:
K
575
Q
H:
V
608
A
L
L:
L
610
S
L:
Y
613
H
L:
R
623
K
L:
E
628
K
L:
V
632
I
L:
N
641
D
L:
I
650
M
L:
T
652
A
L:
D
1037
G
L:
R
1044
G
L:
V
1705
I
L:
I
1710
F
L:
S
1711
P
L:
S
1745
N
L:
V
2096
I
L:
V
2130
I
N
N:
V
234
I
N:
I
406
T
N:
K
441
R
N:
G
443
S
N:
E
446
G
N:
Y
451
N
N:
S
457
I
N:
A
459
L
N:
P
467
L
N:
M
471
T
N:
R
497
K
N:
G
509
S
P
P:
K
195
R
P:
S
219
G
P:
A
269
V
P:
G
270
E
P:
I
282
T
P:
K
350
R
P:
R
355
K
P:
V
414
A
P:
V
446
M
P:
A
459
V
V
V:
K
195
R
V:
S
219
G
V:
G
237
S
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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