This is a preview deployment banner

PPD_000R6TQ.1

USA/PPD_000R6TQ.1/2026-05-18
R. Sainsbury

Utah Public Health Laboratory Infectious Disease submission group, Utah Public Health Laboratory

Sample details

Collection date
2026-05-18
Sampling location
USA (Virginia)
Isolate name
MVs/Virginia.USA/20.26/UT-UPHL-260807126000 [D8]

Data use terms

Data use terms
OPEN
Data use terms URL

Genotype

Genotype
D8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-08-19
NCBI update date
2026-08-19
Raw reads accession

Host

Host

Submission details

Submission ID
PZ830723.1
Submitting group
Date submitted
2026-08-28 12:03:35 UTC
Date released
2026-08-28 12:27:05 UTC
Earliest release date
2026-08-19

Alignment and QC

Length
14864 (55.8%)
# of SNPs
305
# of unknown bases
5991

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions
  • T791C
  • G807A
  • G809C
  • T860C
  • T881C
  • C1043T
  • A1055G
  • G1076A
  • C1101T
  • C1103A
  • C1145T
  • A1151G
  • A1229G
  • C1253T
  • T1324C
  • G1334A
  • C1337T
  • C1352T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

C

  • C:G181V

F

  • F:H419R

H

  • H:R175K
  • H:R334Q
  • H:N390I
  • H:A400T
  • H:V412L
  • H:N416D
  • H:T446S
  • H:V451M

L

  • L:V34L
  • L:R77K
  • L:A81T
  • L:E98G
  • L:T131I
  • L:L610S
  • L:Y613H
  • L:R623K
  • L:E628K
  • L:V632I
  • L:N641D
  • L:I650M
  • L:T652A
  • L:D1037G
  • L:R1044G
  • L:K1122R
  • L:V1125A
  • L:L1170I

N

  • N:V234I
  • N:I406T
  • N:K441R
  • N:G443S
  • N:E446G
  • N:Y451N
  • N:S457I
  • N:A459L
  • N:P467L
  • N:M471T

P

  • P:K195R
  • P:S219G
  • P:A269V
  • P:G270E
  • P:I282T
  • P:K350R
  • P:R355K
  • P:V414A
  • P:V446M
  • P:A459V

V

  • V:K195R
  • V:S219G
  • V:G237S
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue