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PPD_000R6YE.1

USA/PPD_000R6YE.1/2026-05-29
R. Sainsbury

Utah Public Health Laboratory Infectious Disease submission group, Utah Public Health Laboratory

Sample details

Collection date
2026-05-29
Sampling location
USA (Virginia)
Isolate name
MVs/Virginia.USA/22.26/UT-UPHL-260807123083 [D8]

Data use terms

Data use terms
OPEN
Data use terms URL

Genotype

Genotype
D8

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-08-19
NCBI update date
2026-08-19
Raw reads accession

Host

Host

Submission details

Submission ID
PZ830728.1
Submitting group
Date submitted
2026-08-28 12:03:35 UTC
Date released
2026-08-28 12:27:05 UTC
Earliest release date
2026-08-19

Alignment and QC

Length
14993 (54.5%)
# of SNPs
274
# of ambiguous bases
23
# of unknown bases
6314

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions
  • T791C
  • G807A
  • G809C
  • T860C
  • T881C
  • C1043T
  • A1055G
  • G1076A
  • C1101T
  • C1103A
  • C1145T
  • A1151G
  • A1229G
  • C1253T
  • T1324C
  • G1334A
  • C1337T
  • C1352T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

H

  • H:R175K
  • H:G235E
  • H:G243E
  • H:A267I
  • H:N416D
  • H:T446S
  • H:V451M
  • H:K575Q
  • H:V608A

L

  • L:P275S
  • L:L610S
  • L:Y613H
  • L:D1037G
  • L:R1044G
  • L:V1343I
  • L:S1356P
  • L:V1705I
  • L:I1710F
  • L:S1711P
  • L:S1745N
  • L:V2096I
  • L:V2130I
  • L:V2175L

N

  • N:V234I
  • N:I406T
  • N:K441R
  • N:G443S
  • N:E446G
  • N:Y451N
  • N:S457I
  • N:A459L
  • N:P467L
  • N:M471T

P

  • P:A269V
  • P:K350R
  • P:R355K
  • P:V414A
  • P:V446M
  • P:A459V
  • P:Y480C

V

  • V:G237S
Deletions
N/A
Insertions
N/A

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