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PPD_001P3BV.1

Display Name: Viet_Nam/PPD_001P3BV.1/2025-04-07
T. T. V. Trieu, P. L. Do & T. M. D. Nguyen

Sample details

Collection date
2025-04-07
Country
Viet Nam
Admin level 1
Cao Bang
Isolate name
MVs/Cao Bang.VNM/15.25/2[B3]

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-17 10:47insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
B3

Authors

Author affiliations
National Institute of Hygiene and Epidemiology, Virology

INSDC

INSDC accession
NCBI release date
2025-05-28
NCBI update date
2025-05-28

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
450
# of SNPs
38
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
Completeness
2.83%

Submission details

Submission ID
PV659865.1
Submitting group
Date submitted
2025-09-17 10:47:26 UTC
Date released
2025-09-17 11:00:11 UTC
Earliest release date
2025-05-28

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • C1253T
  • C1271T
  • T1328C
  • G1334A
  • C1337T
  • A1387G
  • A1394G
  • A1397G
  • G1398A
  • C1409T
  • A1415G
  • T1418C
  • G1434A
  • G1435A
  • T1436C
  • G1439A
  • G1441A
  • A1449C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001498.1 reference

    Substitutions

    N

  • N:N427S
  • N:G431R
  • N:G443N
  • N:G445E
  • N:Y451H
  • N:G455E
  • N:S456P
  • N:A462V
  • N:S470G
  • N:M471T
  • N:S481F
  • N:G482S
  • N:L505S
  • N:G509D
    • Deletions
    None
    Insertions
    None

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