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PPD_001RSR7.1

Display Name: Cameroon/PPD_001RSR7.1/2024-07
M. Gasparine

Sample details

Collection date
2024-07
Country
Cameroon
Isolate name
Akonolinga

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-17 10:51insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Corsica, Unite des Virus Emergents

INSDC

INSDC accession L
NCBI release date
2025-03-11

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics L

Length L
173
# of SNPs L
8
# of inserted bases L
0
# of deleted bases L
0
# of ambiguous bases L
0
# of unknown bases L
0
# of frame shifts L
0
Completeness L
1.43%

Submission details

Submission ID
PV112929.1.L
Submitting group
Date submitted
2025-09-17 10:51:39 UTC
Date released
2025-09-17 11:09:14 UTC
Earliest release date
2025-03-11

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • L:C9612T
  • L:C9619A
  • L:C9622T
  • L:A9641C
  • L:C9649T
  • L:T9655G
  • L:C9664T
  • L:G9764A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    RdRp

  • RdRp:T3179I
  • RdRp:K3189Q
  • RdRp:V3230I
    • Deletions
    None
    Insertions
    None

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