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PPD_001XGLF.1

USA/PPD_001XGLF.1/2026-03-13
R. Sainsbury

State of Utah, Unified Public Health Laboratory, Department of Health and Human Services

Sample details

Collection date
2026-03-13
Sampling location
USA (Utah)
Isolate name
MVs/Utah.USA/11.26/UT-UPHL-260327209976 [D8]

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-11 16:13insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
D8

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Host

Host

Submission details

Submission ID
PZ226157.1
Submitting group
Date submitted
2026-04-11 16:12:24 UTC
Date released
2026-04-11 18:04:51 UTC
Earliest release date
2026-04-05

Alignment and QC

Length
15223 (53.7%)
# of SNPs
272
# of unknown bases
6685

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • A413G
  • T422C
  • T449C
  • C518T
  • C538T
  • T572C
  • C596T
  • G626A
  • C629T
  • G650A
  • A747C
  • T791C
  • G809C
  • T860C
  • T881C
  • C1043T
  • C1053T
  • A1055G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

F

  • F:H419R

H

  • H:R175K
  • H:G235E
  • H:G243E
  • H:A267I
  • H:R334Q
  • H:N390I
  • H:A400T
  • H:V412L
  • H:N416D
  • H:T436A
  • H:T446S
  • H:V451M

L

  • L:L610S
  • L:Y613H
  • L:R623K
  • L:E628K
  • L:V632I
  • L:N641D
  • L:I650M
  • L:T652A
  • L:D1037G
  • L:R1044G
  • L:V1705I
  • L:I1710F
  • L:S1711P
  • L:S1745N
  • L:V2096I
  • L:R2119Q
  • L:V2130I

N

  • N:S144F
  • N:K214Q
  • N:M399I
  • N:I406T
  • N:K441R
  • N:G443S
  • N:E446G
  • N:Y451N
  • N:S457I
  • N:A459L
  • N:P467L
  • N:M471T
  • N:R497K
  • N:G509S

P

  • P:S219G
  • P:A269V
  • P:G270E
  • P:I282T
  • P:K350R
  • P:A459V

V

  • V:S219G
  • V:G237S
Deletions
N/A
Insertions
N/A

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