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PPD_0022JL3.1

Display Name: China/PPD_0022JL3.1/2013-03
G. Cui, R. Zhu, J. Deng, L. Zhao, Y. Sun, F. Wang & Y. Qian

Submission details

Submission ID
KM434001.1
Submitting group
Date submitted
2025-07-16 15:12:40 UTC
Date released
2025-07-16 15:18:53 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-16 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Capital Institute of Pediatrics, Laboratory of Virology

Alignment and QC metrics

Completeness
6.34%
Length
966
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
17
Total unknown nucs
0

Sample details

Earliest release date
2015-06-22
Collection country
China
Collection date
2013-03
Collection date (lower bound)
2013-03-01
Collection date (upper bound)
2013-03-31
Isolate name
BJ/43849

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2015-06-22
NCBI update date
2015-06-22

Lineage

Lineage
A.D

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C4863T
  • C4919T
  • C4927T
  • T4936C
  • C4952T
  • T5052A
  • G5322A
  • A5357G
  • C5374A
  • G5379T
  • A5435G
  • A5444C
  • C5472T
  • A5482C
  • A5502G
  • G5507A
  • C5544T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:I134K
  • G:G224E
  • G:I236V
  • G:S243I
  • G:K262E
  • G:I265L
  • G:P274L
  • G:D284G
  • G:E286K
  • G:P298L
    • Deletions
    None
    Insertions
    None

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