This is the main branch

PPD_0022YGY.1

Display Name: China/PPD_0022YGY.1/2013-12-20
X. Yu, Y. Kou, D. Xia, J. Li, X. Yang, Y. Zhou & X. He

Submission details

Submission ID
KP336496.1
Submitting group
Date submitted
2025-07-16 15:12:40 UTC
Date released
2025-07-16 15:19:25 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-16 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Hangzhou Center for Disease Control and Prevention, Microbiology Laboratory

Alignment and QC metrics

Completeness
2.25%
Length
342
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
11
Total unknown nucs
0

Sample details

Earliest release date
2015-08-05
Collection country
China
Collection date
2013-12-20
Collection date (lower bound)
2013-12-20
Collection date (upper bound)
2013-12-20
Isolate name
HZ13-s20

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2015-08-05
NCBI update date
2015-08-05

Lineage

Lineage
A.D

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • G5322A
  • C5374A
  • G5379T
  • C5385T
  • A5435G
  • A5444C
  • C5472T
  • A5502G
  • C5544T
  • T5563C
  • A5606G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:G224E
  • G:S243I
  • G:T245I
  • G:K262E
  • G:I265L
  • G:P274L
  • G:D284G
  • G:P298L
  • G:T319A
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue