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PPD_0022YJT.1

Display Name: China/PPD_0022YJT.1/2007-01-17
Z. Y. Zhang, L. N. Du, X. Chen, Y. Zhao, E. M. Liu, X. Q. Yang, X. D. Zhao, Z.-Y. Zhang, L.-N. Du, E.-M. Liu, X.-Q. Yang & X.-D. Zhao

Submission details

Submission ID
GU550456.1
Submitting group
Date submitted
2025-07-04 13:19:30 UTC
Date released
2025-07-04 13:23:04 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-04 13:20insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Children's Hospital of Chongqing Medical University, Division of Immunology

Alignment and QC metrics

Completeness
2.25%
Length
270
Total ambiguous nucs
0
Total deleted nucs
72
Total frame shifts
0
Total inserted nucs
0
Total SNPs
12
Total unknown nucs
0

Sample details

Earliest release date
2010-03-14
Collection country
China
Collection date
2007-01-17
Collection date (lower bound)
2007-01-17
Collection date (upper bound)
2007-01-17

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2010-03-14
NCBI update date
2010-04-02

Lineage

Lineage
A.3.1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • G5322A
  • T5332C
  • T5341C
  • G5346A
  • A5360G
  • T5368C
  • C5374A
  • G5379T
  • A5409C
  • T5540A
  • C5544T
  • T5592C
    • Deletions
    5435-5506
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:G224E
  • G:G232E
  • G:N237D
  • G:S243I
  • G:K253T
  • G:Y297N
  • G:P298L
  • G:L314P
    • Deletions
    G:262-285
    Insertions
    None

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