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PPD_00238BW.1

Display Name: China/PPD_00238BW.1/2012-03-22
W. P. Hu & F. X. Pei

Submission details

Submission ID
KT765051.1
Submitting group
Date submitted
2025-07-16 15:12:40 UTC
Date released
2025-07-16 15:19:25 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-16 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
West China School of Public Health, Sichuan University, Department of Public Health Laboratory Sciences

Alignment and QC metrics

Completeness
2.25%
Length
270
Total ambiguous nucs
0
Total deleted nucs
72
Total frame shifts
0
Total inserted nucs
0
Total SNPs
11
Total unknown nucs
0

Sample details

Earliest release date
2016-03-08
Collection country
China
Collection date
2012-03-22
Collection date (lower bound)
2012-03-22
Collection date (upper bound)
2012-03-22
Isolate name
CD12032204

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2016-03-08
NCBI update date
2016-03-08

Lineage

Lineage
A.3.1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • G5322A
  • T5332C
  • T5341C
  • G5346A
  • A5360G
  • T5368C
  • C5374A
  • G5379T
  • C5401A
  • A5409C
  • C5544T
    • Deletions
    5435-5506
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:G224E
  • G:G232E
  • G:N237D
  • G:S243I
  • G:K253T
  • G:P298L
    • Deletions
    G:262-285
    Insertions
    None

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