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PPD_0028U2J.1

Tajikistan/PPD_0028U2J.1/2023-05-23
J. D'Addiego, M. Mullojanova, T. Hikmatov, F. Tishkova & R. Hewson

UK Health Security Agency, Research & Evaluation

Sample details

Collection date
2023-05-23
Sampling location
Tajikistan
Isolate name
CCHFV_14_169

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-11 16:24insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2025-04-05

Host

Host

Submission details

Submission ID
PV390612.1.S
Submitting group
Date submitted
2026-04-11 16:23:38 UTC
Date released
2026-04-11 17:44:40 UTC
Earliest release date
2025-04-05

Lineage

Segment S Lineage
IV.2

Alignment and QC

Length S
1254 (74.4%)
# of SNPs S
177
# of inserted bases S
1
# of ambiguous bases S
9

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A425G
  • G428T
  • G429A
  • A439G
  • C445T
  • T446C
  • A460G
  • C478T
  • C484A
  • C487T
  • A490G
  • T496C
  • C497T
  • G499A
  • A503C
  • C505T
  • C514T
  • G538A
Deletions
N/A
Insertions

S

ins_1579:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:T124A
  • NP:G125Y
  • NP:N150H
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:K263R
  • NP:R270K
  • NP:S275N
  • NP:S301G
  • NP:V436I
Deletions
N/A
Insertions
N/A

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