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PPD_002H73J.1

Display Name: Taiwan/PPD_002H73J.1/2020
C. Y. Lee, T. H. Wu, Y. P. Fang, J. C. Chang, H. C. Wang, S. J. Lin, C. H. Mai, Y. C. Chang, T. Y. Chou & C.-Y. Lee

Submission details

Submission ID
MZ747629.1
Submitting group
Date submitted
2025-07-16 15:13:13 UTC
Date released
2025-07-16 15:25:43 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-16 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Show-Chwan Memorial Hospital, Pediatrics

Alignment and QC metrics

Completeness
4.39%
Length
669
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
24
Total unknown nucs
0

Sample details

Earliest release date
2022-01-26
Collection country
Taiwan
Collection date
2020
Collection date (lower bound)
2020-01-01
Collection date (upper bound)
2020-12-31

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2022-01-26
NCBI update date
2022-01-26

Lineage

Lineage
A.D.5

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C4952T
  • G5020A
  • T5052A
  • T5075C
  • G5152A
  • C5248A
  • C5268A
  • T5302C
  • G5322A
  • T5341C
  • C5352A
  • A5354G
  • T5368C
  • C5374A
  • G5379T
  • C5393A
  • A5435G
  • A5439G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:L101F
  • G:I134K
  • G:P206Q
  • G:G224E
  • G:P234Q
  • G:T235A
  • G:S243I
  • G:L248I
  • G:K262E
  • G:E263G
  • G:I265L
  • G:D284G
  • G:V303A
  • G:L310P
  • G:T320A
    • Deletions
    None
    Insertions
    None

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