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PPD_002H7R7.1

Display Name: Taiwan/PPD_002H7R7.1/2020
C. Y. Lee, T. H. Wu, Y. P. Fang, J. C. Chang, H. C. Wang, S. J. Lin, C. H. Mai, Y. C. Chang, T. Y. Chou & C.-Y. Lee

Submission details

Submission ID
MZ747651.1
Submitting group
Date submitted
2025-07-16 15:13:13 UTC
Date released
2025-07-16 15:25:43 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-16 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Show-Chwan Memorial Hospital, Pediatrics

Alignment and QC metrics

Completeness
4.39%
Length
669
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
29
Total unknown nucs
0

Sample details

Earliest release date
2022-01-26
Collection country
Taiwan
Collection date
2020
Collection date (lower bound)
2020-01-01
Collection date (upper bound)
2020-12-31

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2022-01-26
NCBI update date
2022-01-26

Lineage

Lineage
A.D.3

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • C4952T
  • C4989T
  • G5020A
  • T5043A
  • C5044T
  • T5052A
  • A5130G
  • A5164G
  • A5183G
  • A5184G
  • C5203T
  • G5254A
  • G5322A
  • T5332C
  • T5341C
  • T5368C
  • C5374A
  • G5379T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    G

  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N160S
  • G:N178G
  • G:G224E
  • G:S243I
  • G:E257K
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:P274L
  • G:D284G
  • G:P298L
  • G:Y304H
    • Deletions
    None
    Insertions
    None

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