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PPD_002SXFL.1

DENV-2/China/19XN28481*/2019-11-21
W. Su, L. Jiang & Y. Cao

Guangzhou Center for Disease Control and Prevention, Derpartment of Virology and Immunity

Sample details

Collection date
2019-11-21
Sampling location
China
Isolate name
19XN28481*

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2020-01-15
NCBI update date
2020-01-15

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MN915183.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:26:12 UTC
Earliest release date
2020-01-15

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

Alignment and QC

Length
1493 (13.9%)
# of SNPs
102

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • C893T
  • C921T
  • A922G
  • C945T
  • G954A
  • C993T
  • T1009C
  • A1011G
  • A1014G
  • C1047T
  • A1077G
  • C1086G
  • G1092T
  • T1095C
  • C1101T
  • C1113T
  • T1116C
  • A1125G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

E

  • E:M6I
  • E:Q52H
  • E:E71A
  • E:R120T
  • E:V129I
  • E:H149N
  • E:I164V
  • E:N390S
  • E:V428M
  • E:I462V
  • E:T478S

prM

  • prM:G152V
  • prM:I153L
  • prM:M159T
  • prM:L160A
  • prM:T162A
  • prM:A166T
Deletions
N/A
Insertions
N/A

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