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PPD_002SYDP.1

DENV-3/China/19XN28959*/2019-11-21
W. Su, L. Jiang & Y. Cao

Guangzhou Center for Disease Control and Prevention, Derpartment of Virology and Immunity

Sample details

Collection date
2019-11-21
Sampling location
China
Isolate name
19XN28959*

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2020-01-15
NCBI update date
2020-01-15

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MN915215.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:26:12 UTC
Earliest release date
2020-01-15

Lineage & Serotype

Lineage
3III_B.3.1
Serotype
DENV-3

Alignment and QC

Length
1603 (15%)
# of SNPs
66

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • C856T
  • T874C
  • C878T
  • C901T
  • T905C
  • T908C
  • A952G
  • G976T
  • A979G
  • T988C
  • C1009A
  • T1030C
  • G1054A
  • C1132T
  • G1189A
  • T1216C
  • C1228T
  • T1234C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

E

  • E:V158I
  • E:A219T
  • E:E404A

prM

  • prM:A143Y
  • prM:I148L
  • prM:G152V
  • prM:I153V
  • prM:A166T
Deletions
N/A
Insertions
N/A

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