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PPD_002TYN2.1

DENV-3/Indonesia/JBB-138/2019-12
A. Aryati, B. J. Wrahatnala, B. Yohan, M. Fanny, F. K. N. Hakim, E. P. Sunari, N. Zuroidah, P. Wardhani, M. S. Santoso, D. Husada, A. Rohman, S. N. Tarmizi, J. T. O. Sievers, R. T. Sasmono, M. Tanzilia, I. E. Sunari, F. K. Hakim & J. T. Sievers

Eijkman Institute for Molecular Biology, Dengue Research Unit

Sample details

Collection date
2019-12
Sampling location
Indonesia (Jember)
Isolate name
JBB-138

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2020-08-28
NCBI update date
2020-08-28

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MT377734.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:29:14 UTC
Earliest release date
2020-08-28

Lineage & Serotype

Lineage
3I_A.1
Serotype
DENV-3

Alignment and QC

Length
1479 (13.8%)
# of SNPs
129

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • T967C
  • G976T
  • G991A
  • G1012A
  • G1018T
  • G1021A
  • T1060C
  • T1069C
  • G1072A
  • G1096A
  • G1108A
  • G1123A
  • T1129C
  • A1136G
  • A1138G
  • T1144C
  • A1153G
  • T1156C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

E

  • E:I68V
  • E:V81I
  • E:L82S
  • E:Y90H
  • E:W101L
  • E:P124L
  • E:Y132H
  • E:T169V
  • E:A219T
  • E:R231K
  • E:N270T
  • E:T301S
  • E:T303A
  • E:P362L
  • E:V377I
  • E:N383K
  • E:K386R
  • E:E404A
Deletions
N/A
Insertions
N/A

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