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PPD_002UEQE.1

DENV-2/China/myseq71/2019-12-15
M. yingying

Shanghai Public Health Clinical Center, Translational Medicine Institute

Sample details

Collection date
2019-12-15
Sampling location
China (Shanghai)
Isolate name
myseq71

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2020-12-31
NCBI update date
2020-12-31

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MT856329.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:30:14 UTC
Earliest release date
2020-12-31

Lineage & Serotype

Lineage
2II_A.2.1
Serotype
DENV-2

Alignment and QC

Length
1485 (13.8%)
# of SNPs
100

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • T942C
  • C945T
  • G954A
  • T960C
  • G1032A
  • T1062C
  • A1068G
  • A1089G
  • G1092A
  • C1101T
  • A1131G
  • A1146G
  • A1148C
  • C1155A
  • A1164G
  • C1176T
  • T1185C
  • C1218T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

E

  • E:M6I
  • E:E71A
  • E:R120T
  • E:V129I
  • E:H149N
  • E:I162V
  • E:I164V
  • E:G190S
  • E:N390S
  • E:I462V
  • E:T478S
  • E:I484V
Deletions
N/A
Insertions
N/A

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