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PPD_002V130.1
Download
Download FASTA
Download metadata TSV
DENV-4/China/20XN34963_D4_Malaysia/2020-06-18
L. Jiang,
Y. Cao &
W. Su
Guangzhou Center for Disease Control and Prevention, Derpartment of Virology and Immunity
Sample details
Collection date
2020-06-18
Sampling location
China (Guangzhou)
Isolate name
20XN34963_D4_Malaysia
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-11 17:30
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession
MW301595.1
NCBI release date
2020-12-04
NCBI update date
2020-12-04
Host
Host
9606
Host name - scientific
Homo sapiens
Submission details
Submission ID
MW301595.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:34:16 UTC
Earliest release date
2020-12-04
Lineage & Serotype
Lineage
4II_A
Serotype
DENV-4
Alignment and QC
Length
10281 (96.5%)
# of SNPs
649
# of inserted bases
2
# of ambiguous bases
1
Nucleotide mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
G
77
A
T
212
C
T
215
C
T
257
C
A
278
G
G
299
A
G
311
A
A
320
G
C
365
T
C
372
T
G
374
A
C
386
T
G
387
A
G
389
A
A
394
G
G
404
A
A
407
G
C
419
T
Show more
Deletions
N/A
Insertions
ins_10288:GA
Amino acid mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
2K
2K:
I
21
V
C
C:
G
96
R
C:
K
98
R
C:
I
102
M
E
E:
S
120
L
E:
M
163
T
E:
K
325
N
E:
Y
326
N
E:
L
357
F
E:
N
384
D
E:
I
455
V
E:
N
469
S
NS1
NS1:
A
6
V
NS1:
S
9
N
NS1:
N
24
S
NS1:
V
88
I
NS1:
S
109
N
NS1:
S
152
F
NS1:
K
245
R
NS1:
D
290
N
NS2A
NS2A:
Q
2
E
NS2A:
V
27
I
NS2A:
V
37
I
NS2A:
L
40
F
NS2A:
L
113
F
NS2A:
Q
138
H
NS2A:
M
158
I
NS2A:
L
171
F
NS2A:
R
181
K
NS2A:
S
183
T
NS2B
NS2B:
V
74
I
NS2B:
T
119
A
NS2B:
M
123
I
NS3
NS3:
K
14
Q
NS3:
A
17
T
NS3:
R
142
K
NS3:
S
292
C
NS3:
T
322
I
NS3:
K
381
R
NS3:
P
435
T
NS3:
V
473
I
NS3:
E
558
K
NS3:
R
594
K
NS4A
NS4A:
R
36
K
NS4A:
I
78
M
NS4A:
G
84
V
NS4A:
T
87
S
NS4B
NS4B:
A
175
V
NS4B:
F
187
L
NS4B:
L
199
M
NS5
NS5:
K
46
R
NS5:
V
71
I
NS5:
K
200
R
NS5:
H
201
Y
NS5:
N
204
S
NS5:
T
235
I
NS5:
H
247
Y
NS5:
V
373
I
NS5:
N
390
S
NS5:
T
420
A
NS5:
G
499
S
NS5:
E
501
G
NS5:
E
521
D
NS5:
M
530
I
NS5:
Q
548
L
NS5:
I
563
T
NS5:
R
586
K
NS5:
K
646
R
Show more
prM
prM:
T
4
S
prM:
G
7
D
prM:
H
11
L
prM:
S
15
A
prM:
Q
17
H
prM:
K
21
R
prM:
S
22
P
prM:
S
28
T
prM:
A
29
E
prM:
V
31
I
prM:
M
33
K
prM:
L
44
M
prM:
M
49
V
prM:
R
55
L
prM:
I
56
L
prM:
T
57
V
prM:
E
58
N
prM:
D
62
E
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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