This is a preview deployment banner
X
Pathoplexus
Organisms
Dengue Virus
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
Dengue Virus
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
Yellow Fever Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Legal notice
Funding
Contact
Status
Dengue Virus
|
Browse data
Submit sequences
Tools
Select organism section
Browse data
Submit sequences
Tools
PPD_002V8UA.1
Download
Download FASTA
Download metadata TSV
DENV-2/China/PPD_002V8UA.1/2020-10-18
L. Jiang,
Y. Cao &
W. Su
Guangzhou Center for Disease Control and Prevention, Derpartment of Virology and Immunity
Sample details
Collection date
2020-10-18
Sampling location
China (Guangzhou)
Isolate name
20XN94959 D2 FULL local
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-11 17:30
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession
MW345921.1
NCBI release date
2020-12-14
NCBI update date
2020-12-14
Host
Host
9606
Host name - scientific
Homo sapiens
Submission details
Submission ID
MW345921.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:34:16 UTC
Earliest release date
2020-12-14
Lineage & Serotype
Lineage
2II_F.1.1
Serotype
DENV-2
Alignment and QC
Length
10549 (98.4%)
# of SNPs
813
Nucleotide mutations
Mutations called relative to the
NC_001474.2
reference
Substitutions
A
122
G
C
126
T
G
168
A
A
177
G
G
210
A
T
226
C
A
228
G
A
230
G
G
252
A
A
276
G
G
294
A
G
297
A
T
312
C
A
324
G
T
330
C
T
336
C
T
384
C
T
397
A
Show more
Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_001474.2
reference
Substitutions
2K
2K:
N
5
T
C
C:
K
9
R
C:
K
45
R
C:
S
101
T
C:
M
104
I
C:
L
108
M
E
E:
M
6
I
E:
Q
52
H
E:
E
71
A
E:
R
120
T
E:
V
129
I
E:
H
149
N
E:
I
164
V
E:
T
176
A
E:
V
347
A
E:
N
390
S
E:
I
462
V
E:
T
478
S
E:
I
484
V
NS1
NS1:
S
80
T
NS1:
T
117
A
NS1:
S
128
L
NS1:
Q
131
H
NS1:
K
174
R
NS1:
F
178
S
NS1:
N
222
S
NS1:
L
247
F
NS1:
I
264
T
NS1:
T
265
A
NS1:
K
272
R
NS1:
D
281
E
NS1:
L
338
S
NS2A
NS2A:
V
5
I
NS2A:
V
36
A
NS2A:
M
136
I
NS2A:
I
171
A
NS2B
NS2B:
L
21
F
NS2B:
V
59
I
NS2B:
K
60
R
NS2B:
D
63
E
NS3
NS3:
M
13
V
NS3:
K
15
R
NS3:
A
120
T
NS3:
I
140
V
NS3:
A
160
T
NS3:
R
186
K
NS3:
V
273
I
NS3:
I
333
M
NS3:
V
395
I
NS3:
I
461
V
NS4A
NS4A:
D
23
N
NS4A:
R
76
K
NS4A:
I
89
V
NS4B
NS4B:
L
13
F
NS4B:
A
19
T
NS4B:
V
48
I
NS4B:
F
112
L
NS4B:
T
244
V
NS5
NS5:
I
5
T
NS5:
S
15
N
NS5:
M
70
L
NS5:
R
98
K
NS5:
I
135
T
NS5:
Y
247
H
NS5:
I
271
V
NS5:
V
335
I
NS5:
R
430
G
NS5:
E
560
A
NS5:
K
570
R
NS5:
G
605
V
NS5:
I
637
A
NS5:
Q
644
K
NS5:
A
648
V
NS5:
S
676
N
NS5:
I
687
V
NS5:
K
800
T
NS5:
D
826
E
NS5:
A
865
T
prM
prM:
G
7
N
prM:
K
16
R
prM:
R
19
K
prM:
S
28
E
prM:
A
29
N
prM:
I
37
M
prM:
M
49
I
prM:
K
52
N
prM:
R
55
L
prM:
I
56
L
prM:
T
57
R
prM:
E
58
Q
prM:
T
59
N
prM:
D
62
E
prM:
V
64
I
prM:
A
70
S
prM:
E
72
S
prM:
S
81
T
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue