This is a preview deployment banner

PPD_002X97E.1

DENV-1/India/PPD_002X97E.1/2019-12
M. Datta, M. Singhai, U. Sharma, N. Gupta, P. Singh, H. Lall, S. Garg, A. Annette, Y. S. Shah, G. Singh, P. Khatri, N. Akoj, P. Rakshit & S. Kabra

National Centre for Disease Control, Division of Biotechnology

Sample details

Collection date
2019-12
Sampling location
India (Noida)
Isolate name
2019/Z-31

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2021-02-10
NCBI update date
2021-02-10

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MW564903.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:40:19 UTC
Earliest release date
2021-02-10

Lineage & Serotype

Lineage
1III_A.3
Serotype
DENV-1

Alignment and QC

Length
483 (4.5%)
# of SNPs
25

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • C150A
  • A166G
  • T171G
  • T208C
  • T230A
  • T244C
  • T274C
  • G302A
  • G349A
  • A351G
  • A355G
  • A363G
  • T368C
  • G388A
  • T397C
  • C443T
  • C451A
  • G466A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

C

  • C:A19E
  • C:V26G
  • C:L46M
  • C:G70S
  • C:K86R
  • C:N90S

prM

  • prM:T59A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue