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PPD_002YAKL.1

Display Name: USA/PPD_002YAKL.1/2025-04-16
A. S. Lauring & L. K. Papalambros

Sample details

Collection date
2025-04-16
Country
USA
Isolate name
hRSV-A-G25Y96Z6

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-17 10:56insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.1

Authors

Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease

INSDC

INSDC accession
BioProject accession
NCBI release date
2025-06-14
NCBI update date
2025-06-14

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
14919
# of SNPs
194
# of inserted bases
0
# of deleted bases
1
# of ambiguous bases
0
# of unknown bases
1514
# of frame shifts
0
Completeness
88.05%

Submission details

Submission ID
PV719546.1
Submitting group
Date submitted
2025-09-17 10:55:50 UTC
Date released
2025-09-17 11:29:42 UTC
Earliest release date
2025-06-14

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • T142C
  • C183T
  • G198A
  • T210C
  • A399G
  • T922C
  • C952T
  • G1000A
  • C1012T
  • T1035A
  • T1048C
  • G1050A
  • C1194T
  • T1359C
  • G1662A
    • Deletions
    4592
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the PP109421.1 reference

    Substitutions

    F

  • F:T122A
  • F:S377N

    • G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T118I
  • G:I134K
  • G:L142S
  • G:P222L
  • G:G224E
  • G:G232R
  • G:S243I
  • G:G254E
  • G:K262E
  • G:I265L
  • G:Y273H
  • G:D284G
  • G:Y304H
  • G:T320A

    • L

  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:I1653V
  • L:K1661N
  • L:N1723S
  • L:E1725G
  • L:K1726R
  • L:G1731D
  • L:S1789F

    • M

  • M:M43I

    • M2-1

  • M2-1:S176P

    • M2-2

  • M2-2:Y26C
  • M2-2:S46N

    • N

  • N:V352A

    • P

  • P:L55P

    • SH

  • SH:I38S
    • Deletions
    None
    Insertions
    None

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