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PPD_002YXPR.1
Download
Download FASTA
Download metadata TSV
DENV-2/Cameroon/19123476/2019-12-29
P. Selhorst
Institute of Tropical Medicine Belgium, Virology
Sample details
Collection date
2019-12-29
Sampling location
Cameroon
Isolate name
19123476
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-11 17:30
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession
MZ130525.1
NCBI release date
2023-05-01
NCBI update date
2023-05-01
Host
Host
9606
Host name - scientific
Homo sapiens
Submission details
Submission ID
MZ130525.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:50:31 UTC
Earliest release date
2023-05-01
Lineage & Serotype
Lineage
2II_B
Serotype
DENV-2
Alignment and QC
Length
10597 (96.9%)
# of SNPs
751
# of ambiguous bases
4
# of unknown bases
199
Nucleotide mutations
Mutations called relative to the
NC_001474.2
reference
Substitutions
C
54
T
A
122
G
C
126
T
A
228
G
C
232
T
G
252
A
A
276
G
G
294
A
G
297
A
T
312
C
A
324
G
T
330
C
T
336
C
T
337
C
G
345
A
G
372
A
C
375
T
T
384
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_001474.2
reference
Substitutions
2K
2K:
V
17
M
C
C:
K
9
R
C:
S
101
T
C:
M
104
I
C:
A
114
T
E
E:
M
6
I
E:
E
71
A
E:
R
120
T
E:
H
149
N
E:
I
322
V
E:
V
324
I
E:
M
401
V
E:
I
462
V
E:
T
478
S
E:
I
484
V
E:
M
492
V
NS1
NS1:
I
21
V
NS1:
S
128
L
NS1:
T
146
I
NS1:
K
174
R
NS1:
V
220
I
NS1:
N
222
S
NS1:
I
264
T
NS1:
T
265
A
NS1:
M
275
V
NS1:
D
278
N
NS1:
D
281
E
NS2A
NS2A:
V
5
I
NS2A:
R
94
K
NS2A:
K
99
R
NS2A:
M
136
I
NS2A:
V
147
A
NS2A:
T
189
A
NS2B
NS2B:
K
60
R
NS2B:
D
63
E
NS3
NS3:
M
13
V
NS3:
A
120
T
NS3:
I
140
V
NS3:
A
160
T
NS3:
R
186
K
NS3:
I
333
M
NS3:
V
395
I
NS3:
V
567
I
NS4A
NS4A:
R
76
K
NS4B
NS4B:
L
13
F
NS4B:
V
48
I
NS4B:
F
112
L
NS4B:
T
244
A
NS5
NS5:
I
5
T
NS5:
S
15
N
NS5:
A
19
T
NS5:
I
27
A
NS5:
M
70
L
NS5:
T
72
I
NS5:
I
135
T
NS5:
V
156
I
NS5:
Y
247
H
NS5:
I
271
T
NS5:
V
335
I
NS5:
M
337
T
NS5:
K
562
R
NS5:
K
570
R
NS5:
E
616
G
NS5:
I
637
V
NS5:
A
642
T
NS5:
I
687
V
Show more
prM
prM:
G
7
N
prM:
K
16
R
prM:
R
19
K
prM:
S
28
E
prM:
A
29
D
prM:
I
37
M
prM:
M
49
I
prM:
K
52
N
prM:
R
55
L
prM:
I
56
L
prM:
T
57
R
prM:
E
58
Q
prM:
T
59
N
prM:
D
62
E
prM:
V
64
I
prM:
A
70
S
prM:
E
72
S
prM:
S
81
T
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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