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PPD_002Z1X3.1

DENV-2/India/def2/2021-05-25
S. Roja

SRI RAMACHANDRA INSTITUTE OF HIGHER EDUCATION AND RESEARCH, MEDICAL BIOINFORMATICS

Sample details

Collection date
2021-05-25
Sampling location
India
Isolate name
def2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-11 17:30insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2021-05-30
NCBI update date
2021-05-30

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
MZ278208.1
Submitting group
Date submitted
2026-03-11 17:28:14 UTC
Date released
2026-03-11 19:50:31 UTC
Earliest release date
2021-05-30

Lineage & Serotype

Lineage
2II_B
Serotype
DENV-2

Alignment and QC

Length
1713 (16%)
# of SNPs
127

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • C837T
  • G843A
  • C856T
  • C885T
  • C893T
  • T905C
  • T907C
  • A909G
  • G912A
  • A915G
  • T918C
  • A922G
  • C945T
  • G954A
  • A1014G
  • C1047T
  • A1053G
  • G1092A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

E

  • E:M6I
  • E:E71A
  • E:R120T
  • E:H149N
  • E:I322V
  • E:V324I
  • E:M401V
  • E:I462V
  • E:T478S
  • E:I484V
  • E:M492V

NS1

  • NS1:I21V

prM

  • prM:V135I
  • prM:I136M
  • prM:L138A
  • prM:F139I
  • prM:H142Y
  • prM:A143T
  • prM:S147T
  • prM:I148H
  • prM:T149F
  • prM:K151R
  • prM:G152V
  • prM:I153L
  • prM:I156T
  • prM:M159T
  • prM:L160A
  • prM:T162A
  • prM:A166T
Deletions
N/A
Insertions
N/A

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