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PPD_003GLTS.1

Display Name: Spain/PPD_003GLTS.1/2025-04-22
C. Andres, A. Gonzalez Sanchez, I. Prats, K. Garcia Comunas, E. Dima, M. C. Martin, T. Pumarola & A. Anton

Sample details

Collection date
2025-04-22
Country
Spain
Admin level 1
Catalonia
Isolate name
hRSV/B/Spain/CT-HUVH583781/2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-09-17 11:00insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.2

Authors

Author affiliations
Hospital Universitari Vall d'Hebron, Barcelona, Barcelona

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2025-07-01
NCBI update date
2025-07-01

Alignment and QC metrics

Length
15206
# of SNPs
133
# of inserted bases
8
# of deleted bases
2
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
Completeness
99.86%

Submission details

Submission ID
OZ280090.1
Submitting group
Date submitted
2025-09-17 11:00:02 UTC
Date released
2025-09-17 11:06:23 UTC
Earliest release date
2025-07-01

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G27A
  • A369G
  • G513T
  • G579A
  • C583T
  • G599A
  • G1028A
  • G1096A
  • T1366C
  • G1385A
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • A2325G
  • T2457C
  • C2554T
    • Deletions
    973, 4588
    Insertions
    ins_15092:ATATATAT

    Amino acid mutations

    Mutations called relative to the OP975389.1 reference

    Substitutions

    F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:A116T
  • G:T131A
  • G:I137T
  • G:T208I
  • G:P214S
  • G:P221L
  • G:T244S
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H

    • L

  • L:S169P
  • L:K570R
  • L:S1470T
  • L:R1759K
  • L:T1987I

    • M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

    • N

  • N:V97I

    • NS1

  • NS1:I105V

    • NS2

  • NS2:D6N
    • Deletions
    None
    Insertions
    None

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