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PPD_004C0WD.1

DENV-2/India/Seq34_isolate_Delhi/2025-10-05
E. Gupta & R. Agarwal

Institute of Liver and Biliary Sciences, Clinical Virology

Sample details

Collection date
2025-10-05
Sampling location
India (Delhi)
Isolate name
Seq34_isolate_Delhi

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

INSDC

INSDC accession
NCBI release date
2026-08-08
NCBI update date
2026-08-08

Host

Host

Submission details

Submission ID
PZ782632.1
Submitting group
Date submitted
2026-09-09 01:16:04 UTC
Date released
2026-09-09 01:57:23 UTC
Earliest release date
2026-08-08

Alignment and QC

Length
382 (3.56%)
# of SNPs
33

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • C405T
  • G408A
  • C411T
  • C418A
  • T423C
  • T456C
  • C459T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

C

  • C:S101T
  • C:M104I
  • C:L108M

prM

  • prM:I13T
  • prM:K21R
  • prM:D29N
  • prM:K52N
Deletions
N/A
Insertions
N/A

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