This is a preview deployment banner

PPD_004JUZ0.1

USA/PPD_004JUZ0.1/2026-03-11
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-11
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04282

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-11 16:41insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-30
NCBI update date
2026-03-30
Raw reads accession

Host

Host

Submission details

Submission ID
PZ191883.1
Submitting group
Date submitted
2026-04-11 16:41:24 UTC
Date released
2026-04-11 19:45:46 UTC
Earliest release date
2026-03-30

Alignment and QC

Length
15138 (94.6%)
# of SNPs
150
# of inserted bases
2
# of deleted bases
2
# of unknown bases
740

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A276G
  • G332A
  • G513T
  • G579A
  • C628T
  • A664G
  • C739T
  • A965G
  • C998A
  • G1324A
  • T1333C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2203T
  • G2533A
Deletions

973, 4586
Insertions

ins_15092:AT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389H

G

  • G:A74V
  • G:S100G
  • G:T113I
  • G:P214S
  • G:P221L
  • G:P235S
  • G:L250P
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:N590S
  • L:N1660Y
  • L:V1716I
  • L:R1759K
  • L:T1987I

M2-1

  • M2-1:K169N

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:Q48H
  • M2-2:C49F

N

  • N:V97I

NS1

  • NS1:K74E

NS2

  • NS2:I27M

P

  • P:A77T

SH

  • SH:I49M
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue