This is a preview deployment banner
X
Pathoplexus
Organisms
Dengue Virus
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Andes Virus [Hantavirus]
Crimean-Congo Hemorrhagic Fever Virus
Dengue Virus
Ebola Bundibugyo
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
Yellow Fever Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Legal notice
Funding
Contact
Status
Dengue Virus
|
Browse data
Submit sequences
Resources
Select organism section
Browse data
Submit sequences
Resources
PPD_004XQGD.1
Download
Download FASTA
Download metadata TSV
DENV-4/Bangladesh/IEDCR-ARBV2501018/2025-11-05
M. A. O. Nasif,
A. N. Alam,
M. H. K. Jony,
M. A. Bhuiyan,
S. Sultana,
A. Hossen,
L. Karmakar &
T. Shirin
Institute of Epidemiology, Disease Control and Research, Dhaka, Dhaka
Sample details
Collection date
2025-11-05
Sampling location
Bangladesh (Dhaka)
Isolate name
IEDCR-ARBV2501018
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage & Serotype
Lineage
4II_A.1
Serotype
DENV-4
INSDC
INSDC accession
OZ484504.1
BioProject accession
PRJEB114988
BioSample accession
SAMEA122895548
NCBI release date
2026-06-17
NCBI update date
2026-06-18
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OZ484504.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-24 15:11:33 UTC
Date released
2026-07-24 15:44:22 UTC
Earliest release date
2026-06-17
Alignment and QC
Length
10511 (88.8%)
# of SNPs
618
# of unknown bases
1060
Nucleotide mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
G
77
A
T
212
C
T
215
C
C
266
T
A
278
G
G
299
A
G
314
A
G
317
A
A
320
G
C
365
T
C
372
T
G
374
A
C
386
T
G
387
A
A
394
G
G
404
A
A
407
G
C
419
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_002640.1
reference
Substitutions
2K
2K:
I
21
V
C
C:
G
96
R
C:
K
98
R
C:
I
102
M
E
E:
S
120
L
E:
M
163
T
E:
T
239
I
E:
L
357
F
E:
V
364
I
E:
N
384
D
E:
F
461
L
NS1
NS1:
A
6
V
NS1:
S
9
N
NS1:
H
50
Y
NS1:
S
109
N
NS1:
S
131
N
NS1:
P
144
S
NS1:
S
152
F
NS1:
L
153
F
NS1:
F
171
L
NS1:
K
245
R
NS1:
V
265
A
NS2A
NS2A:
V
19
M
NS2A:
M
51
V
NS2A:
L
113
F
NS2A:
Q
138
H
NS2A:
M
158
T
NS2A:
L
171
F
NS2B
NS2B:
V
74
I
NS2B:
T
119
A
NS2B:
M
123
I
NS3
NS3:
K
14
Q
NS3:
A
17
T
NS3:
L
30
F
NS3:
R
142
K
NS3:
S
292
C
NS3:
A
321
S
NS3:
T
322
I
NS3:
K
381
R
NS3:
P
435
T
NS3:
E
558
K
NS3:
R
594
K
NS4A
NS4A:
S
12
T
NS4A:
R
20
K
NS4A:
R
36
K
NS4A:
T
87
A
NS4B
NS4B:
A
175
V
NS4B:
F
187
L
NS4B:
L
199
M
NS5
NS5:
Q
139
H
NS5:
K
200
R
NS5:
N
204
S
NS5:
T
235
I
NS5:
I
276
V
NS5:
Q
285
R
NS5:
I
335
V
NS5:
V
373
I
NS5:
K
387
R
NS5:
N
390
S
NS5:
S
429
N
NS5:
G
499
S
NS5:
E
501
Q
NS5:
E
521
D
NS5:
M
530
I
NS5:
Q
548
L
NS5:
I
563
T
NS5:
R
586
K
Show more
prM
prM:
G
7
D
prM:
H
11
L
prM:
S
15
A
prM:
T
107
A
prM:
Q
119
H
prM:
I
120
A
prM:
K
122
R
prM:
T
125
S
prM:
A
127
I
prM:
H
130
N
prM:
T
134
A
prM:
V
135
L
prM:
I
136
L
prM:
L
138
G
prM:
L
140
M
prM:
A
143
M
prM:
T
146
Q
prM:
S
147
T
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue