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PPD_005TD6H.1

Brazil/PPD_005TD6H.1/2004-06
C. Ramsden, F. L. Melo, L. M. Figueiredo, E. C. Holmes, P. M. Zanotto, C. T. Braconi & P. M. A. Zanotto

LEMB, Institute of Biomedical Science, Dept. Microbiology

Sample details

Collection date
2004-06
Sampling location
Brazil
Isolate name
SS_DF_bol47/1806

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 21:00insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
INSDC accession S
NCBI release date
2007-12-09

Host

Host

Submission details

Submission ID
EU170164.1.M/EU170219.1.S
Submitting group
Date submitted
2026-05-09 21:00:41 UTC
Date released
2026-05-09 21:01:13 UTC
Earliest release date
2007-12-09

Alignment and QC

Length M
310 (8.44%)
# of SNPs M
69
Length S
249 (13.3%)
# of SNPs S
44

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • C1995A
  • C1997T
  • A2004T
  • G2007A
  • A2016C
  • A2017C
  • G2019T
  • G2022A
  • T2023G
  • A2025T
  • C2028G
  • G2040T
  • T2043A
  • T2049A
  • T2055G
  • A2059C
  • G2070A
  • A2073T

S

  • C292A
  • T306C
  • A312G
  • A318G
  • T327A
  • C328T
  • G330A
  • C345A
  • T354C
  • A360T
  • T366C
  • T367C
  • G369T
  • A372G
  • A375G
  • G378A
  • T381C
  • A384C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:A649V
  • GPC:M656L
  • GPC:S658A
  • GPC:I670L
  • GPC:E701D
  • GPC:V714I
  • GPC:P721S
  • GPC:T729V
  • GPC:F730L

N

  • N:L84I

NSs

  • NSs:I62T
Deletions
N/A
Insertions
N/A

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